Package: pigx-rnaseq
Architecture: all
Version: 0.1.1-1
Priority: optional
Section: universe/science
Origin: Ubuntu
Maintainer: Ubuntu Developers <ubuntu-devel-discuss@lists.ubuntu.com>
Original-Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Bugs: https://bugs.launchpad.net/ubuntu/+filebug
Installed-Size: 176
Depends: fastp, fastqc, hisat2 | rna-star, libjs-jquery-datatables, libjs-jquery-tablesorter, megadepth, multiqc, python3:any, python3-deeptools, python3-htseq, r-bioc-deseq2, r-bioc-rtracklayer, r-bioc-summarizedexperiment, r-bioc-tximport, r-cran-corrplot, r-cran-crosstalk, r-cran-data.table, r-cran-dt, r-cran-ggplot2, r-cran-ggpubr, r-cran-ggrepel, r-cran-gprofiler2, r-cran-pheatmap, r-cran-plotly, r-cran-reshape2, r-cran-rjson, r-cran-rlang, r-cran-rmarkdown, r-cran-scales, salmon, samtools, snakemake, trim-galore
Recommends: hisat2, rna-star
Filename: pool/universe/p/pigx-rnaseq/pigx-rnaseq_0.1.1-1_all.deb
Size: 53156
MD5sum: ab5b7978da2622a2d47766a37078d60a
SHA1: b846166f8609dd2c44e405c54d61469b4662457f
SHA256: c2583402f0238fb1f739532085e70bdfacf3c2999a59f11b0d24d694186a7961
SHA512: 51a6b99e70557689d09d6d28ad23bfaf864611c53ac816ecd32472fafa9e2e8c73ccd464237bfa54f82546531c745c6c89a61c227bdec892001d41dda2517692
Homepage: https://github.com/BIMSBbioinfo/pigx_rnaseq
Description: pipeline for checkpointed and distributed RNA-seq analyses
Description-md5: e48b7ff1eb2b189a5bedb2ce0c32035c